TY - JOUR TI - The systems biology markup language (SBML): a medium forrepresentation and exchange of biochemical network models AU - Michael Hucka AU - Andrew Finney AU - Herbert M. Sauro AU - Hamid Bolouri AU - John C. Doyle AU - Hiroaki Kitano AU - Adam P. Arkin AU - B. Bornstein AU - D. Bray AU - Athel Cornish‐Bowden AU - Autumn Cuellar AU - С. М. Дронов AU - E. D. Gilles AU - Martin Ginkel AU - V. Gor AU - Igor Goryanin AU - Warren Hedley AU - Charlie Hodgman AU - Jan Hofmeyr AU - Peter Hunter AU - Nick Juty AU - Jay Kasberger AU - Andreas Kremling AU - Ursula Kummer AU - Nicolas Le Novère AU - Leslie M. Loew AU - Daniel Lucio AU - Pedro Mendes AU - Eric Minch AU - Eric Mjolsness AU - Yoichi Nakayama AU - M. R. Nelson AU - Poul Nielsen AU - Takeshi Sakurada AU - James C. Schaff AU - Bruce E. Shapiro AU - Thomas Shimizu AU - H. D. Spence AU - Joerg Stelling AU - Koichi Takahashi AU - Masaru Tomita AU - J. Wagner AU - Jian Wang PY - 2003 JO - Bioinformatics DO - 10.1093/bioinformatics/btg015 UR - https://doi.org/10.1093/bioinformatics/btg015 AB - MOTIVATION: Molecular biotechnology now makes it possible to build elaborate systems models, but the systems biology community needs information standards if models are to be shared, evaluated and developed cooperatively. RESULTS: We summarize the Systems Biology Markup Language (SBML) Level 1, a free, open, XML-based format for representing biochemical reaction networks. SBML is a software-independent language for describing models common to research in many areas of computational biology, including cell signaling pathways, metabolic pathways, gene regulation, and others. AVAILABILITY: The specification of SBML Level 1 is freely available from http://www.sbml.org/ ER -